STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_15431Poly(A)-specific ribonuclease PARN. (291 aa)    
Predicted Functional Partners:
MNEG_6174
Putative DCP2 decapping enzyme.
     
 0.693
MNEG_6558
Uncharacterized protein.
     
 0.657
MNEG_10073
Exosome complex exonuclease RRP46.
     
 0.624
MNEG_0257
Exosome complex exonuclease RRP40.
     
 0.545
MNEG_8994
Exosome complex exonuclease RRP42.
     
 0.543
MNEG_6507
Exosome complex exonuclease RRP43.
     
 0.538
MNEG_12589
RNB domain-containing protein.
     
 0.468
MNEG_7703
Exosome complex component RRP41.
     
 0.460
MNEG_0571
Far upstream element-binding protein 3.
    
 0.456
MNEG_1497
C1, subunit of the circadian RNA-binding protein.
    
 0.456
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.