STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_15297Uncharacterized protein. (214 aa)    
Predicted Functional Partners:
MNEG_16139
Uncharacterized protein.
 
  
  0.635
MNEG_5365
Serine--pyruvate aminotransferase.
    
 0.537
MNEG_4201
Serine--glyoxylate transaminase.
    
 0.537
MNEG_8136
Serine--pyruvate aminotransferase.
    
 0.537
MNEG_4022
Baculoviral IAP repeat-containingprotein 6 (Apollon).
    
 0.459
MNEG_1356
Uncharacterized protein.
    
 0.459
MNEG_15597
40S ribosomal protein S27a.
    
  0.454
MNEG_10085
Uncharacterized protein.
    
  0.454
MNEG_7901
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
 0.436
MNEG_5179
ApbA domain-containing protein.
  
 
 0.431
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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