STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_13176Ornithine decarboxylase 1. (58 aa)    
Predicted Functional Partners:
MNEG_5537
Aspartate-semialdehyde dehydrogenase.
  
 
 0.602
MNEG_15705
Diaminopimelate epimerase.
  
 0.577
MNEG_11608
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.537
MNEG_7203
Spermidine synthase.
  
 0.537
MNEG_5123
Delta-1-pyrroline-5-carboxylate synthetase.
     
 0.522
MNEG_5944
26S proteasome regulatory subunit T6.
   
 0.486
MNEG_12854
Carbamoyl-phosphate synthase large subunit.
    
 0.485
MNEG_4579
Carbamoyl-phosphate synthase small subunit.
    
 0.485
MNEG_7554
Aspartate carbamoyltransferase catalytic subunit.
    
 0.485
MNEG_3522
26S proteasome regulatory subunit T2; Belongs to the AAA ATPase family.
    
 0.477
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.