STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_11846Uncharacterized protein. (282 aa)    
Predicted Functional Partners:
MNEG_1544
Peptidyl-prolyl cis-trans isomerase SDCCAG10.
   
 0.953
MNEG_13697
Pre-mRNA-processing factor SLU7.
   
 0.949
MNEG_15758
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.935
MNEG_12818
Uncharacterized protein.
    
 0.934
MNEG_3535
Cir_N domain-containing protein.
   
 0.931
MNEG_16277
Uncharacterized protein.
   
 0.930
MNEG_9856
RING finger protein.
    
 0.929
MNEG_9757
Pre-mRNA-splicing factor SYF2.
   
 0.917
MNEG_11757
Protein crooked neck.
   
 
 0.908
MNEG_6949
Pre-mRNA-splicing factor SYF1.
   
 
 0.905
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.