STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_11439Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
MNEG_2421
Protein kinase domain-containing protein.
   
 0.954
MNEG_4322
Putative Transcription elongation factor SPT4.
    
 0.783
MNEG_16246
Cyclin-C.
     
 0.752
MNEG_5429
Cyclin-H1-1; Belongs to the cyclin family.
     
 0.706
MNEG_10974
Uncharacterized protein.
     
 0.706
MNEG_9240
PWWP domain-containing protein.
   
 
 0.699
MNEG_4563
Histone methyltransferase.
   
 
 0.699
MNEG_16729
Nuclear cap-binding protein subunit 1.
   
 0.691
MNEG_15479
Transcription initiation factor IIB.
     
 0.689
MNEG_10021
Uncharacterized protein.
     
 0.689
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.