STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_12721Arginine/agmatine antiporter. (425 aa)    
Predicted Functional Partners:
MNEG_16582
3-dehydroquinate synthase.
   
 0.532
MNEG_14550
3-phosphoshikimate1-carboxyvinyltransferase.
   
 0.532
MNEG_12000
Dehydroquinate dehydratase/ shikimate dehydrogenase.
   
 0.532
MNEG_14072
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.532
MNEG_5631
3-dehydroquinate synthase.
   
 0.532
MNEG_10256
Aamy domain-containing protein.
    
 0.492
MNEG_9999
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.492
MNEG_9089
Aamy domain-containing protein.
    
 0.492
MNEG_8478
DNA repair system specific for alkylated DNA.
    
 0.492
MNEG_7623
Uncharacterized protein.
    
 0.492
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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