STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_9945Q_MOTIF domain-containing protein. (218 aa)    
Predicted Functional Partners:
MNEG_8856
DEAD-box ATP-dependent RNA helicase 47.
  
   0.552
MNEG_2289
Helicase C-terminal domain-containing protein.
  
   0.533
MNEG_12536
DEAD-box ATP-dependent RNA helicase 7.
  
 
 0.528
MNEG_3020
DEAD-box ATP-dependent RNA helicase 36; Belongs to the DEAD box helicase family.
  
 
 
 0.523
MNEG_14611
Uncharacterized protein.
  
 
 0.512
MNEG_13663
DEAD-box ATP-dependent RNA helicase 39.
  
 
 0.509
MNEG_9579
Uncharacterized protein.
  
 
   0.507
MNEG_8859
DEAD-box ATP-dependent RNA helicase 14; Belongs to the DEAD box helicase family.
  
 
 0.507
MNEG_6961
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
   0.505
MNEG_15101
ATP-dependent RNA helicase DED1; Belongs to the DEAD box helicase family.
  
 
 0.503
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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