STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_9937Proteasome component ECM29. (588 aa)    
Predicted Functional Partners:
MNEG_9938
Uncharacterized protein.
 
     0.947
MNEG_14077
Putative 26S protease regulatory subunit 6A like protein.
   
 
 0.838
MNEG_3321
Proteasome component ECM29.
 
     0.795
MNEG_5944
26S proteasome regulatory subunit T6.
    
 
 0.786
MNEG_4964
26S proteasome non-ATPase regulatory subunit 12.
   
 
 0.766
MNEG_14954
26S proteasome regulatory subunit N12.
    
 
 0.765
MNEG_6814
26S proteasome regulatory subunit T1; Belongs to the AAA ATPase family.
    
 
 0.745
MNEG_5358
26S proteasome regulatory subunit.
   
 
 0.743
MNEG_0963
Putative 26S proteasome non-ATPase regulatory subunit 7.
   
 
 0.741
MNEG_1396
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 
 0.716
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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