STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_9548Carotenoid cleavage dioxygenase 8. (516 aa)    
Predicted Functional Partners:
MNEG_12302
Lignostilbene-alpha,beta-dioxygenase.
  
   
 0.619
MNEG_11129
Lignostilbene-alpha,beta-dioxygenase.
  
   
 0.544
MNEG_0208
WD_REPEATS_REGION domain-containing protein.
      
 0.497
MNEG_6252
Zeaxanthin epoxidase.
      
 0.493
MNEG_1848
Uncharacterized protein.
      
 0.487
MNEG_5123
Delta-1-pyrroline-5-carboxylate synthetase.
      
 0.485
MNEG_14263
Uncharacterized protein.
  
   
 0.469
MNEG_2718
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.459
MNEG_0211
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.459
MNEG_8175
Lycopene beta cyclase.
      
 0.441
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.