STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_11305Uncharacterized protein. (224 aa)    
Predicted Functional Partners:
MNEG_3029
RPA43_OB domain-containing protein.
   
 0.997
MNEG_8496
DNA-directed RNA Polymerase III subunitC5.
   
 0.994
MNEG_4030
DNA-directed RNA polymerase I subunit A12.
   
 0.993
MNEG_9076
DNA-directed RNA polymerase II subunit E.
   
 0.987
MNEG_9762
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.985
MNEG_15919
DNA-directed RNA polymerase I subunit A1.
   
 0.984
MNEG_7710
DNA-directed RNA polymerase I subunit A1.
   
 0.984
MNEG_4960
DNA-directed RNA polymerase I subunit A1.
   
 0.984
MNEG_13126
Uncharacterized protein.
   
 0.982
MNEG_7835
DNA-directed RNA polymerases I, II, and III subunit RPABC3; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 0.979
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
Server load: low (18%) [HD]