STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16714Flagellar associated membrane protein. (125 aa)    
Predicted Functional Partners:
MNEG_1032
COP9 signalosome complex subunit 5.
    
  0.663
MNEG_12035
COP9 signalosome complex subunit 3.
    
  0.658
MNEG_13333
COP9 signalosome complex subunit 2.
   
  0.654
MNEG_6166
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.593
MNEG_4176
RING-box protein 1.
    
 0.583
MNEG_7296
Cullin 3; Belongs to the cullin family.
    
 0.574
MNEG_9347
Cullin-1; Belongs to the cullin family.
    
 0.574
MNEG_3746
Cullin_Nedd8 domain-containing protein.
    
 0.574
MNEG_14161
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 
  0.558
MNEG_9413
CSN8_PSD8_EIF3K domain-containing protein.
    
  0.556
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.