STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16704DNA gyrase subunit A. (276 aa)    
Predicted Functional Partners:
MNEG_16166
DNA gyrase subunit A.
 
     0.946
MNEG_15931
Dihydrofolate reductase.
  
  
 0.776
MNEG_12321
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.643
MNEG_13637
Chromosome condensation complex condensin, subunit H.
   
 
 0.612
MNEG_13250
Small ubiquitin-related modifier.
    
 0.595
MNEG_8171
Uncharacterized protein.
    
 0.595
MNEG_12686
Structural maintenance of chromosomes protein 2-2.
   
 
 0.592
MNEG_5368
Structural maintenance of chromosomes protein 2-1.
   
 
 0.592
MNEG_10095
Putative Structural maintenance of chromosomes protein 6.
   
 
 0.554
MNEG_5564
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
  
 
 0.553
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.