STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16629Elongation factor G 1. (88 aa)    
Predicted Functional Partners:
MNEG_14629
ATP-binding domain-containing protein 4.
   
 0.947
MNEG_11479
40S ribosomal protein S15a-1; Belongs to the universal ribosomal protein uS8 family.
  
 0.828
MNEG_7177
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.828
MNEG_0317
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.828
MNEG_6772
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.827
MNEG_11006
50S ribosomal protein L7/L12.
  
 
 0.821
MNEG_1401
Uncharacterized protein.
  
 
 0.820
MNEG_4919
30S ribosomal protein S16.
  
 
 0.819
MNEG_13224
50S ribosomal protein L27.
  
 
 0.815
MNEG_12324
Ubiquitin-like domain-containing protein.
   
 
 0.804
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.