Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MNEG_0847 | MNEG_10005 | A0A0D2LL67 | A0A0D2MAJ1 | ATP-dependent helicase STH1/SNF2. | Uncharacterized protein. | 0.875 |
MNEG_0847 | MNEG_10907 | A0A0D2LL67 | A0A0D2M7B2 | ATP-dependent helicase STH1/SNF2. | Uncharacterized protein. | 0.908 |
MNEG_0847 | MNEG_1178 | A0A0D2LL67 | A0A0D2K983 | ATP-dependent helicase STH1/SNF2. | Actin-related protein 4. | 0.890 |
MNEG_0847 | MNEG_1180 | A0A0D2LL67 | A0A0D2MW33 | ATP-dependent helicase STH1/SNF2. | Actin-related protein 4; Belongs to the actin family. | 0.890 |
MNEG_0847 | MNEG_12546 | A0A0D2LL67 | A0A0D2MLB1 | ATP-dependent helicase STH1/SNF2. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.955 |
MNEG_0847 | MNEG_16265 | A0A0D2LL67 | A0A0D2LI56 | ATP-dependent helicase STH1/SNF2. | ARID domain-containing protein. | 0.927 |
MNEG_0847 | MNEG_2032 | A0A0D2LL67 | A0A0D2N034 | ATP-dependent helicase STH1/SNF2. | Uncharacterized protein. | 0.857 |
MNEG_0847 | MNEG_5990 | A0A0D2LL67 | A0A0D2JSI4 | ATP-dependent helicase STH1/SNF2. | Putative SWI/SNF complex component SNF12 like protein. | 0.919 |
MNEG_0847 | MNEG_6532 | A0A0D2LL67 | A0A0D2L2C6 | ATP-dependent helicase STH1/SNF2. | Uncharacterized protein. | 0.857 |
MNEG_0847 | MNEG_6677 | A0A0D2LL67 | A0A0D2L1U7 | ATP-dependent helicase STH1/SNF2. | C3H1-type domain-containing protein. | 0.857 |
MNEG_10005 | MNEG_0847 | A0A0D2MAJ1 | A0A0D2LL67 | Uncharacterized protein. | ATP-dependent helicase STH1/SNF2. | 0.875 |
MNEG_10005 | MNEG_10907 | A0A0D2MAJ1 | A0A0D2M7B2 | Uncharacterized protein. | Uncharacterized protein. | 0.898 |
MNEG_10005 | MNEG_1178 | A0A0D2MAJ1 | A0A0D2K983 | Uncharacterized protein. | Actin-related protein 4. | 0.438 |
MNEG_10005 | MNEG_1180 | A0A0D2MAJ1 | A0A0D2MW33 | Uncharacterized protein. | Actin-related protein 4; Belongs to the actin family. | 0.438 |
MNEG_10005 | MNEG_12546 | A0A0D2MAJ1 | A0A0D2MLB1 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.882 |
MNEG_10005 | MNEG_16265 | A0A0D2MAJ1 | A0A0D2LI56 | Uncharacterized protein. | ARID domain-containing protein. | 0.811 |
MNEG_10005 | MNEG_2032 | A0A0D2MAJ1 | A0A0D2N034 | Uncharacterized protein. | Uncharacterized protein. | 0.906 |
MNEG_10005 | MNEG_5990 | A0A0D2MAJ1 | A0A0D2JSI4 | Uncharacterized protein. | Putative SWI/SNF complex component SNF12 like protein. | 0.505 |
MNEG_10005 | MNEG_6532 | A0A0D2MAJ1 | A0A0D2L2C6 | Uncharacterized protein. | Uncharacterized protein. | 0.906 |
MNEG_10005 | MNEG_6677 | A0A0D2MAJ1 | A0A0D2L1U7 | Uncharacterized protein. | C3H1-type domain-containing protein. | 0.906 |
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