STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16087Uncharacterized protein. (199 aa)    
Predicted Functional Partners:
MNEG_15957
Uncharacterized protein.
   
 
 0.968
MNEG_15208
Brix domain-containing protein.
   
 
 0.963
MNEG_5633
Putative RNA-binding protein.
   
 
 0.959
MNEG_13361
RING-type domain-containing protein.
   
 
 0.949
MNEG_1452
WD_REPEATS_REGION domain-containing protein.
   
 
 0.925
MNEG_11189
Uncharacterized protein.
   
 
 0.924
MNEG_15224
Uncharacterized protein.
   
 
 0.918
MNEG_3543
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.906
MNEG_2813
Putative Ribosomal RNA processing protein-like 1.
   
 
 0.902
MNEG_12715
Putative ribosome biogeneis protein.
   
 
 0.896
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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