STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_15518Putative 2-oxoglutarate dehydrogenase E1 component DHKTD1. (220 aa)    
Predicted Functional Partners:
MNEG_12704
2-oxoglutarate dehydrogenase E2 component (Dihydrolipoamide succinyltransferase).
 
 0.989
MNEG_10903
Succinyl-CoA synthetase alpha subunit.
  
 0.902
MNEG_14152
Succinyl-CoA synthetase alpha subunit.
  
 0.902
MNEG_7619
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.887
MNEG_14945
2-oxoisovalerate dehydrogenase E2 component (Dihydrolipoyl transacylase).
  
 0.885
MNEG_12746
2-oxoglutarate dehydrogenase E1 component.
 
     0.861
MNEG_14781
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.856
MNEG_8908
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase).
  
 0.856
MNEG_15814
2-oxoacid_dh domain-containing protein.
  
 0.856
MNEG_11761
Uncharacterized protein.
  
 0.856
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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