STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_7316Uncharacterized protein. (362 aa)    
Predicted Functional Partners:
MNEG_7794
N(6)-adenine-specific DNA methyltransferase 2.
   
  
 0.566
MNEG_4531
Uncharacterized protein.
   
 
 0.528
MNEG_5017
Uncharacterized protein.
   
 
 0.528
MNEG_7793
60S ribosomal protein L3-2; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.522
MNEG_7873
KIN17-like protein.
      
 0.497
MNEG_10536
Peter Pan-like protein.
   
    0.472
MNEG_8591
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
      
 0.469
MNEG_0208
WD_REPEATS_REGION domain-containing protein.
   
 
 0.444
MNEG_16083
Wd-repeat protein.
   
 
 0.444
MNEG_15224
Uncharacterized protein.
   
  
 0.443
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.