STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_5811Signal recognition particle protein, chloroplastic. (436 aa)    
Predicted Functional Partners:
MNEG_1331
Putative Signal recognition particle protein.
   
 0.929
MNEG_14530
Signal recognition particle protein.
   
 0.929
MNEG_6564
Flagellar associated protein.
    
  0.607
MNEG_0206
Uncharacterized protein.
    
 0.603
MNEG_2730
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
     
 0.554
MNEG_13080
ANK_REP_REGION domain-containing protein.
  
 
  0.552
MNEG_0649
ANK_REP_REGION domain-containing protein.
  
 
  0.543
MNEG_5461
ANK_REP_REGION domain-containing protein.
  
 
  0.542
MNEG_0849
Ankyrin-3.
  
 
  0.542
MNEG_1689
Ankyrin-1.
  
 
  0.539
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.