Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MNEG_0603 | MNEG_0683 | A0A0D2LLW5 | A0A0D2MXR4 | Uncharacterized protein. | Transcription initiation factor TFIID subunit12. | 0.982 |
MNEG_0603 | MNEG_12304 | A0A0D2LLW5 | A0A0D2KIS2 | Uncharacterized protein. | Transformation/transcription domain-associated protein. | 0.953 |
MNEG_0603 | MNEG_12320 | A0A0D2LLW5 | A0A0D2LVZ9 | Uncharacterized protein. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.973 |
MNEG_0603 | MNEG_14255 | A0A0D2LLW5 | A0A0D2LPN6 | Uncharacterized protein. | Uncharacterized protein. | 0.983 |
MNEG_0603 | MNEG_15703 | A0A0D2LLW5 | A0A0D2MA54 | Uncharacterized protein. | Uncharacterized protein. | 0.953 |
MNEG_0603 | MNEG_5775 | A0A0D2LLW5 | A0A0D2MGH8 | Uncharacterized protein. | Uncharacterized protein. | 0.566 |
MNEG_0603 | MNEG_8591 | A0A0D2LLW5 | A0A0D2M7L8 | Uncharacterized protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.964 |
MNEG_0683 | MNEG_0603 | A0A0D2MXR4 | A0A0D2LLW5 | Transcription initiation factor TFIID subunit12. | Uncharacterized protein. | 0.982 |
MNEG_0683 | MNEG_12304 | A0A0D2MXR4 | A0A0D2KIS2 | Transcription initiation factor TFIID subunit12. | Transformation/transcription domain-associated protein. | 0.942 |
MNEG_0683 | MNEG_12320 | A0A0D2MXR4 | A0A0D2LVZ9 | Transcription initiation factor TFIID subunit12. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.940 |
MNEG_0683 | MNEG_14255 | A0A0D2MXR4 | A0A0D2LPN6 | Transcription initiation factor TFIID subunit12. | Uncharacterized protein. | 0.984 |
MNEG_0683 | MNEG_15703 | A0A0D2MXR4 | A0A0D2MA54 | Transcription initiation factor TFIID subunit12. | Uncharacterized protein. | 0.942 |
MNEG_0683 | MNEG_5775 | A0A0D2MXR4 | A0A0D2MGH8 | Transcription initiation factor TFIID subunit12. | Uncharacterized protein. | 0.604 |
MNEG_0683 | MNEG_8591 | A0A0D2MXR4 | A0A0D2M7L8 | Transcription initiation factor TFIID subunit12. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.975 |
MNEG_0982 | MNEG_5775 | A0A0D2N3M3 | A0A0D2MGH8 | Heme peroxidase-related protein. | Uncharacterized protein. | 0.597 |
MNEG_12304 | MNEG_0603 | A0A0D2KIS2 | A0A0D2LLW5 | Transformation/transcription domain-associated protein. | Uncharacterized protein. | 0.953 |
MNEG_12304 | MNEG_0683 | A0A0D2KIS2 | A0A0D2MXR4 | Transformation/transcription domain-associated protein. | Transcription initiation factor TFIID subunit12. | 0.942 |
MNEG_12304 | MNEG_12320 | A0A0D2KIS2 | A0A0D2LVZ9 | Transformation/transcription domain-associated protein. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.944 |
MNEG_12304 | MNEG_14255 | A0A0D2KIS2 | A0A0D2LPN6 | Transformation/transcription domain-associated protein. | Uncharacterized protein. | 0.954 |
MNEG_12304 | MNEG_5775 | A0A0D2KIS2 | A0A0D2MGH8 | Transformation/transcription domain-associated protein. | Uncharacterized protein. | 0.554 |
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