STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_13408cAMP-dependent protein kinase regulatory subunit. (139 aa)    
Predicted Functional Partners:
MNEG_14832
cGMP-dependent protein kinase.
   
 0.953
MNEG_6507
Exosome complex exonuclease RRP43.
    
   0.672
MNEG_12112
Putative glycerol uptake facilitator protein.
   
 0.573
MNEG_0428
Flagellar radial spoke protein 3.
   
 0.573
MNEG_1775
Serine/threonine-protein kinase plk-3.
    
 0.568
MNEG_13487
Rab11/RabA-family small GTPase.
   
  0.561
MNEG_2646
Ferredoxin--NADP+ reductase.
    
 0.533
MNEG_1486
Glutamyl-tRNA(Gln) amidotransferase subunit D.
    
 0.494
MNEG_13125
Glutamate synthase (Ferredoxin).
    
 0.458
MNEG_6059
Glutamate synthase (NADPH/NADH).
    
 0.458
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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