STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_13057Uncharacterized protein. (529 aa)    
Predicted Functional Partners:
MNEG_2571
Tryptophan synthase.
 
      0.894
MNEG_3987
Tryptophan synthase alpha chain; Belongs to the TrpA family.
 
      0.879
MNEG_1000
Coiled-coil domain-containing protein 77.
    
 0.514
MNEG_11886
GARS_N domain-containing protein.
  
  
 0.506
MNEG_11688
Malonyl-CoA decarboxylase.
    
 0.487
MNEG_11457
Malate synthase.
   
  
 0.446
MNEG_16206
Vacuolar transporter chaperone 4.
      
 0.441
MNEG_6935
Vacuolar transporter chaperone 2.
      
 0.441
MNEG_12934
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
   
 
 0.437
MNEG_9493
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
   
 
 0.437
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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