STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_6537Ubiquitin C. (381 aa)    
Predicted Functional Partners:
MNEG_1255
Fanconi anemia, complementation group M.
   
 0.946
MNEG_3527
E3 ubiquitin-protein ligase.
   
 0.899
MNEG_0644
ANK_REP_REGION domain-containing protein.
   
 0.888
MNEG_4022
Baculoviral IAP repeat-containingprotein 6 (Apollon).
   
 0.886
MNEG_1356
Uncharacterized protein.
   
 0.886
MNEG_11623
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.884
MNEG_11066
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.870
MNEG_7894
Large subunit ribosomal protein L40e.
  
0.865
MNEG_12749
60S ribosomal protein L21-2.
   
 0.864
MNEG_7177
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.863
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.