STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_11847Reticulon-like protein. (213 aa)    
Predicted Functional Partners:
MNEG_5702
GTP cyclohydrolase I.
    
   0.672
MNEG_16739
Vta1_C domain-containing protein.
    
   0.512
MNEG_14730
Vacuolar protein sorting-associated protein VTA1.
    
   0.512
MNEG_5176
MSP domain-containing protein.
    
 
 0.489
MNEG_0319
GB1/RHD3-type G domain-containing protein.
    
 
 0.480
MNEG_13943
Uncharacterized protein.
    
 
 0.480
MNEG_5602
HVA22-like protein.
   
 
 0.473
MNEG_13037
Uncharacterized protein.
    
  0.456
MNEG_3462
Uncharacterized protein.
    
  0.456
MNEG_9081
Translocation protein SEC63.
    
 
 0.401
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.