STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_10873Puf protein. (812 aa)    
Predicted Functional Partners:
MNEG_8582
DEAD-box ATP-dependent RNA helicase 16.
   
 
 0.933
MNEG_8373
Uncharacterized protein.
   
 
 0.930
MNEG_10990
Uncharacterized protein.
   
 
 0.926
MNEG_10536
Peter Pan-like protein.
   
    0.908
MNEG_11932
Sas10 domain-containing protein.
   
   0.887
MNEG_11561
Uncharacterized protein.
   
   0.887
MNEG_12770
Putative nucleolar protein NOP5-2.
   
   0.865
MNEG_5977
Uncharacterized protein.
   
   0.865
MNEG_8040
WD repeat-containing protein 18.
   
 
 0.849
MNEG_15371
Uncharacterized protein.
   
 
 0.846
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.