STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_4877Uncharacterized protein C19orf29. (735 aa)    
Predicted Functional Partners:
MNEG_7364
Coiled-coil domain-containing protein 12.
     
 0.788
MNEG_16277
Uncharacterized protein.
   
 
 0.754
MNEG_4782
Serine/arginine repetitive matrix protein 1.
     
 0.679
MNEG_13860
Pre-mRNA-splicing factor CWC22.
   
 
  0.643
MNEG_11846
Uncharacterized protein.
   
 
  0.643
MNEG_16619
Pre-mRNA-splicing factor CWC22.
   
 
  0.643
MNEG_12324
Ubiquitin-like domain-containing protein.
    
 0.634
MNEG_15681
Nkap_C domain-containing protein.
   
 
  0.616
MNEG_12893
Uncharacterized protein.
   
  0.591
MNEG_16100
THO complex subunit 4.
    
  0.506
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.