MNEG_10290 protein (Monoraphidium neglectum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MNEG_10290

Protein kinase, putative. (74 aa)

Predicted Functional Partners:

MNEG_13037

0.593

MNEG_3462

0.593

MNEG_1775

0.553

MNEG_0971

0.463

MNEG_1369

0.457

MNEG_0999

0.457

MNEG_12607

0.457

MNEG_5100

0.457

MNEG_4323

0.447

MNEG_1975

0.447

Your Current Organism:

Monoraphidium neglectum

NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MNEG_0971	MNEG_10290	A0A0D2N3M8	A0A0D2MTC7	Protein kinase domain-containing protein.	Protein kinase, putative.	0.463
MNEG_0971	MNEG_1975	A0A0D2N3M8	A0A0D2MTT9	Protein kinase domain-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.572
MNEG_0971	MNEG_4323	A0A0D2N3M8	A0A0D2JYL5	Protein kinase domain-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.572
MNEG_0999	MNEG_10290	A0A0D2K9M0	A0A0D2MTC7	TYR_PHOSPHATASE_2 domain-containing protein.	Protein kinase, putative.	0.457
MNEG_0999	MNEG_1775	A0A0D2K9M0	A0A0D2LID6	TYR_PHOSPHATASE_2 domain-containing protein.	Serine/threonine-protein kinase plk-3.	0.841
MNEG_10290	MNEG_0971	A0A0D2MTC7	A0A0D2N3M8	Protein kinase, putative.	Protein kinase domain-containing protein.	0.463
MNEG_10290	MNEG_0999	A0A0D2MTC7	A0A0D2K9M0	Protein kinase, putative.	TYR_PHOSPHATASE_2 domain-containing protein.	0.457
MNEG_10290	MNEG_12607	A0A0D2MTC7	A0A0D2MKB3	Protein kinase, putative.	TYR_PHOSPHATASE_2 domain-containing protein.	0.457
MNEG_10290	MNEG_13037	A0A0D2MTC7	A0A0D2MIU2	Protein kinase, putative.	Uncharacterized protein.	0.593
MNEG_10290	MNEG_1369	A0A0D2MTC7	A0A0D2K8S4	Protein kinase, putative.	Protein phosphatase.	0.457
MNEG_10290	MNEG_1775	A0A0D2MTC7	A0A0D2LID6	Protein kinase, putative.	Serine/threonine-protein kinase plk-3.	0.553
MNEG_10290	MNEG_1975	A0A0D2MTC7	A0A0D2MTT9	Protein kinase, putative.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.447
MNEG_10290	MNEG_3462	A0A0D2MTC7	A0A0D2NHN0	Protein kinase, putative.	Uncharacterized protein.	0.593
MNEG_10290	MNEG_4323	A0A0D2MTC7	A0A0D2JYL5	Protein kinase, putative.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.447
MNEG_10290	MNEG_5100	A0A0D2MTC7	A0A0D2NBJ5	Protein kinase, putative.	Protein phosphatase.	0.457
MNEG_12607	MNEG_10290	A0A0D2MKB3	A0A0D2MTC7	TYR_PHOSPHATASE_2 domain-containing protein.	Protein kinase, putative.	0.457
MNEG_12607	MNEG_1775	A0A0D2MKB3	A0A0D2LID6	TYR_PHOSPHATASE_2 domain-containing protein.	Serine/threonine-protein kinase plk-3.	0.841
MNEG_13037	MNEG_10290	A0A0D2MIU2	A0A0D2MTC7	Uncharacterized protein.	Protein kinase, putative.	0.593
MNEG_13037	MNEG_1775	A0A0D2MIU2	A0A0D2LID6	Uncharacterized protein.	Serine/threonine-protein kinase plk-3.	0.575
MNEG_13037	MNEG_1975	A0A0D2MIU2	A0A0D2MTT9	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.549