STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_3800Aromatic amino acid aminotransferase I. (292 aa)    
Predicted Functional Partners:
MNEG_1533
Arogenate dehydrogenase 2.
    
 0.971
MNEG_6763
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
    
 0.969
MNEG_3998
Chorismate mutase.
    
 0.941
MNEG_6327
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.940
MNEG_3506
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.940
MNEG_13466
Aspartate aminotransferase.
  
 0.921
MNEG_3068
Aspartate aminotransferase.
  
 0.921
MNEG_2050
Aspartate aminotransferase.
  
 0.921
MNEG_4429
Indoleamine 2,3-dioxygenase 2.
     
 0.918
MNEG_7681
Aromatic-L-amino-acid decarboxylase.
    
 0.909
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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