STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_1565Cell division protease FtsH. (797 aa)    
Predicted Functional Partners:
MNEG_5281
Prohibitin.
   
 0.721
MNEG_0128
Prohibitin.
   
 0.703
MNEG_7257
50S ribosomal protein L2.
   
 
 0.496
MNEG_14325
Uncharacterized protein.
   
 0.493
MNEG_15148
PHB domain-containing protein.
   
 0.493
MNEG_6333
Carboxyl-terminal processing protease.
   
 0.493
MNEG_13224
50S ribosomal protein L27.
  
 
 0.481
MNEG_11253
Eukaryotic translation initiation factor 5A.
  
  
 0.476
MNEG_13298
Eukaryotic translation initiation factor 5A.
  
  
 0.476
MNEG_1612
Ribosomal protein S11.
   
 
 0.470
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.