STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_9184Isocitrate dehydrogenase (NAD+). (179 aa)    
Predicted Functional Partners:
MNEG_11126
Isocitrate dehydrogenase (NAD+).
  
0.997
MNEG_0438
Isocitrate dehydrogenase (NAD+).
  
 0.983
MNEG_3833
Aconitase 2.
  
 0.976
MNEG_1234
Isocitrate dehydrogenase.
  
 0.956
MNEG_11213
Isocitrate dehydrogenase 3 (NAD+) alpha.
 
     0.944
MNEG_3104
L-aspartate oxidase.
  
 0.878
MNEG_3658
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 0.878
MNEG_2778
Argininosuccinate lyase.
  
 
 0.858
MNEG_6804
Glutamate dehydrogenase (NAD(P)+).
   
 
 0.857
MNEG_9026
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.857
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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