STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_8517Uncharacterized protein. (66 aa)    
Predicted Functional Partners:
MNEG_3392
Protein transport protein Sec61 subunit beta.
   
 
 0.752
MNEG_15532
Uncharacterized protein.
   
 
 0.752
MNEG_3433
TPR repeat-containing protein.
    
  0.623
MNEG_8440
Uncharacterized protein.
   
 
  0.604
MNEG_0736
Uncharacterized protein.
     
 0.551
MNEG_2909
Ubiquitin-conjugating enzyme E2 J2.
     
 0.551
MNEG_7570
Syntaxin 5.
     
 0.523
MNEG_14037
Syntaxin-32.
     
 0.523
MNEG_13152
Syntaxin-32.
     
 0.523
MNEG_9278
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
      
 0.497
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.