STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_197250S ribosomal protein L9. (194 aa)    
Predicted Functional Partners:
MNEG_13224
50S ribosomal protein L27.
  
 
 0.987
MNEG_12110
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.987
MNEG_1401
Uncharacterized protein.
  
 
 0.987
MNEG_11006
50S ribosomal protein L7/L12.
   
 
 0.986
MNEG_11479
40S ribosomal protein S15a-1; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.986
MNEG_7177
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.986
MNEG_0317
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.986
MNEG_4919
30S ribosomal protein S16.
   
 
 0.985
MNEG_4474
50S ribosomal protein L33.
  
 
 0.984
MNEG_2980
50S ribosomal protein L28.
  
 
 0.984
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.