STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_7600Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)    
Predicted Functional Partners:
MNEG_12893
Uncharacterized protein.
    
  0.915
MNEG_5089
Putative Ran-binding protein 1 c.
 
 
 0.895
MNEG_12241
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
    
 
 0.724
MNEG_11455
GRANULINS domain-containing protein.
    
 
 0.724
MNEG_0471
Uncharacterized protein; Belongs to the peptidase C1 family.
    
 
 0.720
MNEG_6340
Pept_C1 domain-containing protein.
    
 
 0.720
MNEG_2025
RAN GTPase-activating protein 1.
   
 0.700
MNEG_7846
Uncharacterized protein.
    
 0.677
MNEG_9757
Pre-mRNA-splicing factor SYF2.
  
 
0.675
MNEG_16277
Uncharacterized protein.
    
 0.674
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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