STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_1223Sodium channel protein type 1 subunit alpha. (2118 aa)    
Predicted Functional Partners:
MNEG_5118
Voltage-dependent L-type calcium channel subunit alpha-1D.
  
0.562
MNEG_3266
Sodium channel protein 60E.
  
0.538
MNEG_13246
Tetratricopeptide repeat protein 21B.
   
 0.459
MNEG_16555
Flagellar associated protein.
   
 0.459
MNEG_7526
Tetratricopeptide repeat protein 21B.
   
 0.459
MNEG_1153
Uncharacterized protein.
   
 0.459
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.