STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_4191Short-chain dehydrogenase/reductase SDR. (209 aa)    
Predicted Functional Partners:
MNEG_1995
Beta-ketoacyl synthase.
  
 0.723
MNEG_15931
Dihydrofolate reductase.
   
 
 0.626
MNEG_13452
Uncharacterized protein.
  
 
 0.492
MNEG_9014
3-oxoacyl-[acyl-carrier-protein] reductase.
  
     0.485
MNEG_11772
Arylsulfatase.
   
 
 0.475
MNEG_5513
Sulfatase domain-containing protein.
   
 
 0.433
MNEG_12525
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.422
MNEG_6115
Cytochrome b5 reductase 2.
  
 0.408
MNEG_1964
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.408
MNEG_3237
Nonspecific lipid-transfer protein.
  
 0.405
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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