STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_3925DNA topoisomerase I. (173 aa)    
Predicted Functional Partners:
MNEG_1255
Fanconi anemia, complementation group M.
   
 0.956
MNEG_9993
ATP-dependent DNA helicase recQ.
  
 0.919
MNEG_11995
Uncharacterized protein.
    
 0.853
MNEG_7240
Exonuclease 1.
  
 0.676
MNEG_6449
Cell cycle checkpoint protein RAD17.
  
 0.658
MNEG_16136
Double-strand break repair protein MRE11.
  
 0.642
MNEG_6510
Uncharacterized protein.
  
 
 0.634
MNEG_15931
Dihydrofolate reductase.
  
  
 0.627
MNEG_12354
Uncharacterized protein.
    
 0.607
MNEG_3060
DNA repair protein RAD50.
  
 0.579
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.