Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MNEG_0654 | MNEG_0799 | A0A0D2MXV0 | A0A0D2N4G3 | Photosystem I reaction center subunit V. | Uncharacterized protein. | 0.969 |
MNEG_0654 | MNEG_10354 | A0A0D2MXV0 | A0A0D2M1V1 | Photosystem I reaction center subunit V. | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | 0.966 |
MNEG_0654 | MNEG_10837 | A0A0D2MXV0 | A0A0D2MRC5 | Photosystem I reaction center subunit V. | Photosystem I reaction center subunit VI. | 0.989 |
MNEG_0654 | MNEG_16814 | A0A0D2MXV0 | A0A0D2N6P6 | Photosystem I reaction center subunit V. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.921 |
MNEG_0654 | MNEG_3466 | A0A0D2MXV0 | A0A0D2NHL2 | Photosystem I reaction center subunit V. | Sulfotransfer_1 domain-containing protein. | 0.520 |
MNEG_0654 | MNEG_5854 | A0A0D2MXV0 | A0A0D2L4U6 | Photosystem I reaction center subunit V. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.984 |
MNEG_0799 | MNEG_0654 | A0A0D2N4G3 | A0A0D2MXV0 | Uncharacterized protein. | Photosystem I reaction center subunit V. | 0.969 |
MNEG_0799 | MNEG_10354 | A0A0D2N4G3 | A0A0D2M1V1 | Uncharacterized protein. | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | 0.940 |
MNEG_0799 | MNEG_10837 | A0A0D2N4G3 | A0A0D2MRC5 | Uncharacterized protein. | Photosystem I reaction center subunit VI. | 0.971 |
MNEG_0799 | MNEG_16814 | A0A0D2N4G3 | A0A0D2N6P6 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.883 |
MNEG_0799 | MNEG_3466 | A0A0D2N4G3 | A0A0D2NHL2 | Uncharacterized protein. | Sulfotransfer_1 domain-containing protein. | 0.470 |
MNEG_0799 | MNEG_5854 | A0A0D2N4G3 | A0A0D2L4U6 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.929 |
MNEG_10354 | MNEG_0654 | A0A0D2M1V1 | A0A0D2MXV0 | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | Photosystem I reaction center subunit V. | 0.966 |
MNEG_10354 | MNEG_0799 | A0A0D2M1V1 | A0A0D2N4G3 | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | Uncharacterized protein. | 0.940 |
MNEG_10354 | MNEG_10837 | A0A0D2M1V1 | A0A0D2MRC5 | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | Photosystem I reaction center subunit VI. | 0.974 |
MNEG_10354 | MNEG_16814 | A0A0D2M1V1 | A0A0D2N6P6 | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.946 |
MNEG_10354 | MNEG_3466 | A0A0D2M1V1 | A0A0D2NHL2 | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | Sulfotransfer_1 domain-containing protein. | 0.470 |
MNEG_10354 | MNEG_5854 | A0A0D2M1V1 | A0A0D2L4U6 | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.959 |
MNEG_10837 | MNEG_0654 | A0A0D2MRC5 | A0A0D2MXV0 | Photosystem I reaction center subunit VI. | Photosystem I reaction center subunit V. | 0.989 |
MNEG_10837 | MNEG_0799 | A0A0D2MRC5 | A0A0D2N4G3 | Photosystem I reaction center subunit VI. | Uncharacterized protein. | 0.971 |
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