STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_1389Transcription factor Dp-1. (165 aa)    
Predicted Functional Partners:
MNEG_8180
DUF3452 domain-containing protein.
   
 0.964
MNEG_8369
Uncharacterized protein.
   
 0.954
MNEG_12111
E2F_TDP domain-containing protein.
  
 
 
 0.856
MNEG_4040
DIRP domain-containing protein.
   
 0.816
MNEG_12374
Cyclin-dependent kinase 3.
    
 0.733
MNEG_8285
Uncharacterized protein.
   
 0.692
MNEG_14200
CRC domain-containing protein.
   
 0.692
MNEG_14892
Uncharacterized protein.
   
 0.692
MNEG_9934
Protein lin-54.
   
 0.692
MNEG_5104
Uncharacterized protein.
   
 0.676
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.