STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_0676Cytosolic non-specific dipeptidase. (193 aa)    
Predicted Functional Partners:
MNEG_0677
Peptidase M20.
 
     0.951
MNEG_5668
N-acetyl-gamma-glutamyl-phosphatereductase.
  
 0.788
MNEG_12782
Uncharacterized protein.
    
   0.747
MNEG_10347
Argininosuccinate synthase.
  
 0.689
MNEG_13841
Argininosuccinate synthase.
  
 0.689
MNEG_5123
Delta-1-pyrroline-5-carboxylate synthetase.
     
 0.681
MNEG_15705
Diaminopimelate epimerase.
    
 0.676
MNEG_11984
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.633
MNEG_0962
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
  
 
 0.613
MNEG_0801
Amidohydrolase.
  
 
 0.613
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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