STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_0264SKP1-like protein 1A; Belongs to the SKP1 family. (146 aa)    
Predicted Functional Partners:
MNEG_4176
RING-box protein 1.
   
 0.971
MNEG_9347
Cullin-1; Belongs to the cullin family.
   
 0.965
MNEG_6707
F-box domain-containing protein.
    
 0.944
MNEG_13458
Uncharacterized protein.
   
 
 0.916
MNEG_1032
COP9 signalosome complex subunit 5.
   
 0.909
MNEG_7894
Large subunit ribosomal protein L40e.
    
  0.905
MNEG_11782
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.901
MNEG_12920
F-box and leucine-rich repeat protein 20.
    
 0.899
MNEG_15432
Uncharacterized protein.
    
 0.895
MNEG_7296
Cullin 3; Belongs to the cullin family.
   
 0.895
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.