STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AW07_02718Hypothetical protein. (257 aa)    
Predicted Functional Partners:
htpG
High temperature protein G; Molecular chaperone. Has ATPase activity.
   
 0.909
ttgW
Putative HTH-type transcriptional regulator TtgW.
 
     0.898
AW07_04371
Hypothetical protein.
   
 0.896
kfoC_1
Chondroitin polymerase.
  
 0.875
barA_3
Signal transduction histidine-protein kinase BarA.
  
 0.858
AW07_02720
Patatin.
 
     0.846
AW07_02721
Poly(hydroxyalkanoate) granule-associated protein.
 
   0.842
AW07_01936
PAS domain S-box protein.
   
 0.832
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.809
acr1
Fatty acyl-CoA reductase.
 
    0.806
Your Current Organism:
Accumulibacter sp. SK11
NCBI taxonomy Id: 1454000
Other names: C. Accumulibacter sp. SK-11, Candidatus Accumulibacter sp. SK-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.