Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AW08_00095 | AW08_00096 | AW08_00095 | AW08_00096 | Hypothetical protein. | WbqC-like protein family protein. | 0.744 |
AW08_00095 | arnA | AW08_00095 | AW08_00097 | Hypothetical protein. | Polymyxin resistance protein PmrI. | 0.782 |
AW08_00095 | arnB_1 | AW08_00095 | AW08_00103 | Hypothetical protein. | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.714 |
AW08_00095 | glgB_1 | AW08_00095 | AW08_01085 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme GlgB. | 0.680 |
AW08_00095 | glgB_2 | AW08_00095 | AW08_02750 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme GlgB. | 0.680 |
AW08_00095 | manC1 | AW08_00095 | AW08_00073 | Hypothetical protein. | Mannose-1-phosphate guanylyltransferase 1; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.711 |
AW08_00095 | tagG_1 | AW08_00095 | AW08_00092 | Hypothetical protein. | Teichoic acid translocation permease protein TagG. | 0.753 |
AW08_00095 | tagH_1 | AW08_00095 | AW08_00093 | Hypothetical protein. | Teichoic acids export ATP-binding protein TagH. | 0.797 |
AW08_00095 | tagH_2 | AW08_00095 | AW08_00094 | Hypothetical protein. | Teichoic acids export ATP-binding protein TagH. | 0.797 |
AW08_00095 | tuaH | AW08_00095 | AW08_00091 | Hypothetical protein. | Putative teichuronic acid biosynthesis glycosyltransferase TuaH. | 0.732 |
AW08_00096 | AW08_00095 | AW08_00096 | AW08_00095 | WbqC-like protein family protein. | Hypothetical protein. | 0.744 |
AW08_00096 | arnA | AW08_00096 | AW08_00097 | WbqC-like protein family protein. | Polymyxin resistance protein PmrI. | 0.831 |
AW08_00096 | arnB_1 | AW08_00096 | AW08_00103 | WbqC-like protein family protein. | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.636 |
AW08_00096 | tagG_1 | AW08_00096 | AW08_00092 | WbqC-like protein family protein. | Teichoic acid translocation permease protein TagG. | 0.673 |
AW08_00096 | tagH_1 | AW08_00096 | AW08_00093 | WbqC-like protein family protein. | Teichoic acids export ATP-binding protein TagH. | 0.708 |
AW08_00096 | tagH_2 | AW08_00096 | AW08_00094 | WbqC-like protein family protein. | Teichoic acids export ATP-binding protein TagH. | 0.708 |
AW08_00096 | tuaH | AW08_00096 | AW08_00091 | WbqC-like protein family protein. | Putative teichuronic acid biosynthesis glycosyltransferase TuaH. | 0.665 |
arnA | AW08_00095 | AW08_00097 | AW08_00095 | Polymyxin resistance protein PmrI. | Hypothetical protein. | 0.782 |
arnA | AW08_00096 | AW08_00097 | AW08_00096 | Polymyxin resistance protein PmrI. | WbqC-like protein family protein. | 0.831 |
arnA | arnB_1 | AW08_00097 | AW08_00103 | Polymyxin resistance protein PmrI. | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.914 |
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