STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AW08_00628Putative FAD-linked oxidoreductase. (491 aa)    
Predicted Functional Partners:
AW08_00629
Putative FAD-linked oxidoreductase.
 
  0.991
lutA_1
Lactate utilization protein A.
 
 
 0.980
hoxF
NAD-reducing hydrogenase HoxS subunit alpha.
   
   0.842
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
    
 0.812
gltB_1
Ferredoxin-dependent glutamate synthase 1.
    
 0.799
maeB_1
NADP-dependent malic enzyme.
 
 
 0.762
maeB_2
NADP-dependent malic enzyme.
 
 
 0.762
lutA_2
Lactate utilization protein A.
 
 
 0.739
AW08_02515
Quinol dehydrogenase periplasmic component.
   
  0.719
ubiA
4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.716
Your Current Organism:
Accumulibacter sp. SK12
NCBI taxonomy Id: 1454001
Other names: C. Accumulibacter sp. SK-12, Candidatus Accumulibacter sp. SK-12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.