STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AW08_01416FemAB-related protein, PEP-CTERM system-associated. (361 aa)    
Predicted Functional Partners:
AW08_01417
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
 
     0.953
AW08_01415
Exosortase A.
 
     0.907
AW08_01405
Putative O-glycosylation ligase, exosortase A-associated.
 
     0.836
AW08_01409
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.836
epsF_1
Putative glycosyltransferase EpsF.
 
     0.832
pimB_2
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase.
 
     0.813
etk
Tyrosine-protein kinase etk.
 
     0.801
AW08_01420
Hypothetical protein.
 
     0.795
wbpI_2
UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
     0.782
AW08_01423
Polysaccharide export protein Wza.
 
     0.780
Your Current Organism:
Accumulibacter sp. SK12
NCBI taxonomy Id: 1454001
Other names: C. Accumulibacter sp. SK-12, Candidatus Accumulibacter sp. SK-12
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