STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AW08_01515T4-like virus tail tube protein gp19. (155 aa)    
Predicted Functional Partners:
AW08_01522
Hypothetical protein.
 
 
 
 0.991
AW08_01521
Baseplate wedge subunit.
 
   0.987
AW08_01514
Phage tail sheath protein.
 
 
 0.980
AW08_01516
Hypothetical protein.
 
   0.979
AW08_01518
Phage protein D.
 
 
   0.976
AW08_01512
Major tail sheath protein.
 
 
 0.974
AW08_03870
Baseplate wedge subunit.
 
   0.958
AW08_01519
Rhs element Vgr protein.
 
    0.940
AW08_01523
Phage tail protein domain protein.
 
     0.931
AW08_01524
Hypothetical protein.
 
     0.920
Your Current Organism:
Accumulibacter sp. SK12
NCBI taxonomy Id: 1454001
Other names: C. Accumulibacter sp. SK-12, Candidatus Accumulibacter sp. SK-12
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