STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AW08_02006Putative multidrug export ATP-binding/permease protein. (599 aa)    
Predicted Functional Partners:
apxIB
RTX-I toxin determinant B.
   
 
0.932
eryA
Erythronolide synthase, modules 3 and 4.
  
 0.924
AW08_02364
Putative ABC transporter ATP-binding protein.
  
 
0.843
ftsH2
ATP-dependent zinc metalloprotease FtsH 2.
  
 
 0.773
AW08_02007
Putative relative of glutathione S-transferase, MAPEG superfamily.
       0.761
AW08_03729
Long-chain-fatty-acid--AMP ligase FadD29.
  
 0.737
mpa
Mycobacterial proteasome ATPase.
   
 0.724
yxlF
Putative ABC transporter ATP-binding protein YxlF.
  
0.716
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
   
0.679
AW08_02517
Cobalt transporter ATP-binding subunit.
   
 0.679
Your Current Organism:
Accumulibacter sp. SK12
NCBI taxonomy Id: 1454001
Other names: C. Accumulibacter sp. SK-12, Candidatus Accumulibacter sp. SK-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.