Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AW08_02515 | AW08_02639 | AW08_02515 | AW08_02639 | Quinol dehydrogenase periplasmic component. | Glycolate oxidase subunit GlcD. | 0.884 |
AW08_02515 | eryA | AW08_02515 | AW08_00903 | Quinol dehydrogenase periplasmic component. | Erythronolide synthase, modules 3 and 4. | 0.994 |
AW08_02515 | gltB_1 | AW08_02515 | AW08_00199 | Quinol dehydrogenase periplasmic component. | Ferredoxin-dependent glutamate synthase 1. | 0.895 |
AW08_02515 | hoxF | AW08_02515 | AW08_00140 | Quinol dehydrogenase periplasmic component. | NAD-reducing hydrogenase HoxS subunit alpha. | 0.999 |
AW08_02515 | korA | AW08_02515 | AW08_01797 | Quinol dehydrogenase periplasmic component. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.999 |
AW08_02515 | lutB | AW08_02515 | AW08_01839 | Quinol dehydrogenase periplasmic component. | Lactate utilization protein B. | 0.682 |
AW08_02515 | maeB_1 | AW08_02515 | AW08_01127 | Quinol dehydrogenase periplasmic component. | NADP-dependent malic enzyme. | 0.883 |
AW08_02515 | maeB_2 | AW08_02515 | AW08_01786 | Quinol dehydrogenase periplasmic component. | NADP-dependent malic enzyme. | 0.883 |
AW08_02515 | pyk | AW08_02515 | AW08_01727 | Quinol dehydrogenase periplasmic component. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.898 |
AW08_02515 | sdhB | AW08_02515 | AW08_01000 | Quinol dehydrogenase periplasmic component. | Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.873 |
AW08_02639 | AW08_02515 | AW08_02639 | AW08_02515 | Glycolate oxidase subunit GlcD. | Quinol dehydrogenase periplasmic component. | 0.884 |
AW08_02639 | eryA | AW08_02639 | AW08_00903 | Glycolate oxidase subunit GlcD. | Erythronolide synthase, modules 3 and 4. | 0.871 |
AW08_02639 | gltB_1 | AW08_02639 | AW08_00199 | Glycolate oxidase subunit GlcD. | Ferredoxin-dependent glutamate synthase 1. | 0.924 |
AW08_02639 | hoxF | AW08_02639 | AW08_00140 | Glycolate oxidase subunit GlcD. | NAD-reducing hydrogenase HoxS subunit alpha. | 0.889 |
AW08_02639 | korA | AW08_02639 | AW08_01797 | Glycolate oxidase subunit GlcD. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.869 |
AW08_02639 | lutB | AW08_02639 | AW08_01839 | Glycolate oxidase subunit GlcD. | Lactate utilization protein B. | 0.962 |
AW08_02639 | maeB_1 | AW08_02639 | AW08_01127 | Glycolate oxidase subunit GlcD. | NADP-dependent malic enzyme. | 0.879 |
AW08_02639 | maeB_2 | AW08_02639 | AW08_01786 | Glycolate oxidase subunit GlcD. | NADP-dependent malic enzyme. | 0.879 |
AW08_02639 | pyk | AW08_02639 | AW08_01727 | Glycolate oxidase subunit GlcD. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.865 |
AW08_02639 | sdhB | AW08_02639 | AW08_01000 | Glycolate oxidase subunit GlcD. | Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.936 |
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