Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AW08_03064 | pstS1 | AW08_03064 | AW08_01302 | Flagellar protein FlaG. | Phosphate-binding protein PstS 1 precursor. | 0.470 |
AW08_03064 | pstS_2 | AW08_03064 | AW08_03762 | Flagellar protein FlaG. | Phosphate-binding protein PstS precursor. | 0.470 |
AW08_03835 | phoU | AW08_03835 | AW08_03763 | Phosphate transporter ATP-binding protein. | Phosphate uptake regulator. | 0.945 |
AW08_03835 | pstA | AW08_03835 | AW08_02232 | Phosphate transporter ATP-binding protein. | Phosphate transport system permease protein PstA. | 0.951 |
AW08_03835 | pstC | AW08_03835 | AW08_02233 | Phosphate transporter ATP-binding protein. | Phosphate transport system permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.951 |
AW08_03835 | pstS1 | AW08_03835 | AW08_01302 | Phosphate transporter ATP-binding protein. | Phosphate-binding protein PstS 1 precursor. | 0.777 |
AW08_03835 | pstS_2 | AW08_03835 | AW08_03762 | Phosphate transporter ATP-binding protein. | Phosphate-binding protein PstS precursor. | 0.777 |
fixJ_2 | fixL_3 | AW08_03760 | AW08_03761 | Transcriptional regulatory protein FixJ. | Sensor protein FixL. | 0.984 |
fixJ_2 | phoU | AW08_03760 | AW08_03763 | Transcriptional regulatory protein FixJ. | Phosphate uptake regulator. | 0.401 |
fixJ_2 | pstS_2 | AW08_03760 | AW08_03762 | Transcriptional regulatory protein FixJ. | Phosphate-binding protein PstS precursor. | 0.540 |
fixL_3 | fixJ_2 | AW08_03761 | AW08_03760 | Sensor protein FixL. | Transcriptional regulatory protein FixJ. | 0.984 |
fixL_3 | phoU | AW08_03761 | AW08_03763 | Sensor protein FixL. | Phosphate uptake regulator. | 0.437 |
fixL_3 | pstS_2 | AW08_03761 | AW08_03762 | Sensor protein FixL. | Phosphate-binding protein PstS precursor. | 0.540 |
phoU | AW08_03835 | AW08_03763 | AW08_03835 | Phosphate uptake regulator. | Phosphate transporter ATP-binding protein. | 0.945 |
phoU | fixJ_2 | AW08_03763 | AW08_03760 | Phosphate uptake regulator. | Transcriptional regulatory protein FixJ. | 0.401 |
phoU | fixL_3 | AW08_03763 | AW08_03761 | Phosphate uptake regulator. | Sensor protein FixL. | 0.437 |
phoU | pstA | AW08_03763 | AW08_02232 | Phosphate uptake regulator. | Phosphate transport system permease protein PstA. | 0.992 |
phoU | pstB | AW08_03763 | AW08_02231 | Phosphate uptake regulator. | Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.985 |
phoU | pstC | AW08_03763 | AW08_02233 | Phosphate uptake regulator. | Phosphate transport system permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.846 |
phoU | pstS1 | AW08_03763 | AW08_01302 | Phosphate uptake regulator. | Phosphate-binding protein PstS 1 precursor. | 0.852 |
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