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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (503 aa)    
Predicted Functional Partners:
glpD
Aerobic glycerol-3-phosphate dehydrogenase.
 0.999
aqpZ
Bacterial nodulin-like intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 0.983
ftsH_3
ATP-dependent zinc metalloprotease FtsH.
   
  0.880
ftsH_4
ATP-dependent zinc metalloprotease FtsH.
   
  0.880
alaS_1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.866
AW11_02834
Putative FAD-linked oxidoreductase.
  
 
 0.861
AW11_04061
Putative FAD-linked oxidoreductase.
  
 
 0.861
AW11_02151
Putative fatty-acid--CoA ligase fadD21.
 
 
 0.844
AW11_03199
Hypothetical protein.
    
  0.843
ugpQ
Glycerophosphoryl diester phosphodiesterase.
 
 
 0.840
Your Current Organism:
Accumulibacter sp. BA93
NCBI taxonomy Id: 1454004
Other names: C. Accumulibacter sp. BA-93, Candidatus Accumulibacter sp. BA-93
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