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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankXPhosphocholine transferase AnkX. (204 aa)    
Predicted Functional Partners:
AW11_00564
Calcineurin-like phosphoesterase.
    
  0.958
AW11_03805
Calcineurin-like phosphoesterase.
    
  0.958
AW11_02114
EF hand.
    
 0.957
nuoF_1
NADH-quinone oxidoreductase subunit F.
   
   0.935
AW11_02151
Putative fatty-acid--CoA ligase fadD21.
   
 0.935
hoxF
NAD-reducing hydrogenase HoxS subunit alpha.
   
   0.935
hrpB
ATP-dependent RNA helicase HrpB.
    
 0.923
AW11_03638
Exonuclease subunit SbcD.
    
  0.922
ascD_2
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
    
 0.908
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
  0.898
Your Current Organism:
Accumulibacter sp. BA93
NCBI taxonomy Id: 1454004
Other names: C. Accumulibacter sp. BA-93, Candidatus Accumulibacter sp. BA-93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.