STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR03443.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)    
Predicted Functional Partners:
AJR03442.1
Biotin attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
AJR03441.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
AJR03444.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.956
AJR03534.1
Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.931
AJR03446.1
Cytochrome Cbb3 oxidase maturation protein CcoH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.596
AJR03815.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  
0.543
AJR03445.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
AJR03473.1
Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
0.521
AJR03943.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
0.521
AJR03777.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
Your Current Organism:
Siansivirga zeaxanthinifaciens
NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.